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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7724386 chr5:176682590 T/G LOC388955 chr2:63849182-63850159:- 0.38 9.01 5.13E-18 Box Plot
THCA rs7724563 chr5:170822764 C/T CLEC2D chr12:9817565-9852151:+ -0.18 -5.92 6.03E-9 Box Plot
THCA rs77249451 chr6:151747246 G/T NEK5 chr13:52607747-52703214:- 0.59 6.69 6.14E-11 Box Plot
THCA rs7725171 chr5:45923786 T/A LOC647121 chr1:121260910-121313686:+ 0.37 7.76 5.27E-14 Box Plot
THCA rs7725537 chr5:45927293 A/G LOC647121 chr1:121260910-121313686:+ 0.37 7.88 2.23E-14 Box Plot
THCA rs77259578 chr2:132193579 C/T CCDC74B chr2:130896860-130902707:- 0.37 6.48 2.31E-10 Box Plot
THCA rs7726438 chr5:151704049 T/C FILIP1L chr3:99548985-99833357:- 0.21 5.87 8.0E-9 Box Plot
THCA rs7727331 chr5:45945301 A/G LOC647121 chr1:121260910-121313686:+ 0.38 8.03 7.59E-15 Box Plot
THCA rs7727890 chr5:45478771 G/A LOC647121 chr1:121260910-121313686:+ 0.34 7.25 1.65E-12 Box Plot
THCA rs772920 chr12:56390364 C/G RPS26P11 chrX:71264395-71264742:+ 0.49 8.73 4.37E-17 Box Plot
THCA rs7729379 chr5:151679458 T/C FILIP1L chr3:99548985-99833357:- -0.22 -6.36 4.62E-10 Box Plot
THCA rs77294241 chr1:121242314 G/A NBPF14 chr1:148003642-148025863:- -0.4 -8.94 8.66E-18 Box Plot
THCA rs7731023 chr5:36181627 A/G SLC30A2 chr1:26363743-26372624:- 0.25 6.1 2.15E-9 Box Plot
THCA rs773108 chr12:56369911 A/G RPS26P11 chrX:71264395-71264742:+ 0.51 8.64 8.57E-17 Box Plot
THCA rs773109 chr12:56374695 G/A RPS26P11 chrX:71264395-71264742:+ 0.5 8.76 3.3E-17 Box Plot